龟甲的特异性PCR及高分辨率熔解曲线技术鉴别方法研究 |
投稿时间:2019-04-10 点此下载全文
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引用本文:张雪艳,袁媛,胡启跳,蒋超,方成武.龟甲的特异性PCR及高分辨率熔解曲线技术鉴别方法研究[J].中国现代中药,2019,21(9):1215-1220 |
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基金项目:中央本级重大增减支项目(2060302);中央级公益性科研院所基本科研业务费专项(ZZ10-008) |
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中文摘要:目的:建立高效、稳定的龟甲Testudinis Carapax et Plastrum DNA鉴别方法。方法:利用龟甲的特异性聚合酶链式反应(Polymerase Chain Reaction,PCR)鉴别方法和高分辨率熔解曲线(HRM)鉴别方法,根据龟甲及其混伪品COI序列差异,寻找特异性单核苷酸多态性(single nucleotide polymorphism,SNP)位点设计鉴别引物,并对PCR反应条件进行优化;并使用通用引物扩增COI区域,产物直接进行HRM分析。结果:当退火温度为60 ℃,循环次数为35,使用设计的龟甲特异性鉴别引物GJ-360.F/R进行PCR扩增,经扩增均获得约360 bp特异性鉴别条带,混伪品皆无条带;使用通用引物RonM-tl和Vl-tl进行PCR扩增,产物使用HRM分析,龟甲药材在模板DNA质量浓度为3.5~87.9 ng·μL-1、引物浓度为0.2 μmol·L-1、镁离子浓度为2.0 mmol·L-1的条件下,龟甲药材标准熔解曲线为双峰,其Tm均值分别为(83.15±0.76)、(87.53±0.69)℃。结论:特异性PCR和HRM均可作为一种快速准确鉴别龟甲正伪品的鉴定方法。 |
中文关键词:龟甲 特异性聚合酶链式反应 分子鉴定 高分辨率熔解曲线 |
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Identification of Testudinis Carapax et Plastrum by Specific PCR Method and High-resolution Melting Analysis |
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Abstract:Objective:To establish an efficient and stable DNA identification method for Testudinis Carapax et Plastrum(TCP).Methods:Based on the COI sequence differences between TCP and its adulterants,specific SNP loci were designed and primers were identified by using specific PCR and high-resolution melting curve(HRM)methods,and the conditions of PCR reaction were optimized.The COI region was amplified by universal primers,and the products were analyzed by HRM directly.Results:When the annealing temperature was 60 ℃ and the cycle number was 35,a specific band of 360 bp was visual on the gel electropherogram were using the designed TCP specific primer Guijia.F/R.high-resolution melting curve(HRM)technology was also applied to identification of TCP using COI universal primers.The annealing temperature was 60 ℃ and cycle number was 40.With chosen appropriate DNA template concentration,and the primer concentration as well as Mg2+concentration,an HRM model was established.The high melting curve of TCP was bimodal melting curve under these conditions,when the DNA template concentration was 3.5-87.9 ng·μL-1,the primer concentration was 0.2 μmol·L-1,Mg2+concentration was 2.0 mmol·L-1,the Tm value of HRM curve was(83.15±0.76)and(87.53±0.69),respectively.Conclusion:The results show that these two methods could use as rapid and accurate identification method for identify TCP and its adulterants. |
keywords:Testudinis Carapax et Plastrum specific PCR molecular identification High-resolution melting curve |
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